lumi **

Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design.

** an open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University.


Illumina UML model

When you are talking about an "array", it can be confusing for the Illumina platform.

Why? Illumina is an "array-of-array" platform. Some poeple use the word "array" the same as "chip"; it can create a big problem in the communication!

To formally specify a model for the knowledge domain of Illumina, we used the Unified Modeling Language (UML). A draft model can be like this:


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