Lumi is an ongoing project for Illumina microarray data analysis, including the design of a software package in R/Bioconductor and the discussion of microarray experiment design.
** an open source project at the Bioinformatics Core of the Robert H. Lurie Comprehensive Cancer Center, Northwestern University.
Adding nuID to BeadStudio Outputs
Here is quick review from the BeadStudio Manual.
Labels: BeadStudio, nuID
Group Gene Profile, Sample Probe Profile, vs. Sample Gene Profile,
A lot of statisticians who are new to Illumina data analysis always ask the difference between the following files: Group/Sample Gene/Probe Profiles. Here I found a good screen shot from BeadStudio.
Labels: BeadStudio, Illumina, Sample Probe Profile